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Superimposition of 3-Dimensional Cone-
Beam Computed-Tomograpny Models
by: Lucia H. S. Cevidatens,
Alexandre Motta,
Martin A. Styner,
and William R. Proffit
From the Fall 2006 AADMRT Newsletter
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Dr. Lucia Cevidanes
UNC Dep. of Orthodontics
UNC School of Dentistry
Chapel Hill, NC
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This paper contains recent updates of our work on 3D
superimposition and our publication in the American Journal of
Orthodontics and Dentofacial Orthopedics,
129(5):611-8. Three-dimensional (3D) imaging techniques and
tools now also includes analysis of soft tissue structures and
computer simulation of surgical procedures. 3D image analysis
can provide valuable information to clinicians and
researchers.But as we move from traditional 2-dimensional (2D)
cephalometric analysis to new 3D techniques, it is often
necessary to compare 2D with 3D data. Cone-beam computed
tomography (CBCT) provides simulation tools that can help bridge
the gap between image types. CBCT acquisitions can be made to
simulate panoramic, lateral, and posteroanterior cephalometric
radioagraphs so that they can be compared with preexisting
cephalometric databases. Applications of 3D imaging in
orthodontics include initial diagnosis and superimpositions for
assessing growth, treatment changes, and
stability. Three-dimensional CBCT images show dental root
inclination and torque, impacted and supernumerary tooth
positions, thickness and morphology of bone at sites of
mini-implants for anchorage, and osteotomy sites in surgical
planning. Findings such as resorption, hyperplasic growth,
displacement, shape anomalies of mandibular condyles, and
morphological differences between the right and left sides
emphasize the diagnostic value of computed tomography
acquisitions. Furthermore, relationships of soft tissues and
the airway can be assessed in 3 dimensions.
To routinely benefit from 3-dimensional (3D) imaging, which
can provide stacks of axial, lateral, and anteroposterior
slices, clinicians need user-friendly tools to construct virtual
3D models.
These can be used in initial diagnosis and assessing changes
as a result of treatment. Although shape analysis tools have
become more readily available, most current software requires
some computer expertise. As new tools are developed, we can
navigate away from the limitations of conventional
cephalometrics, but we still need to allow comparisons to
previously acquired cephalograms.1 It
is important to be able to use superimpositions and current
images to evaluate growth changes. Various techniques for the
reconstruction of 3D computed tomography (CT) images have been
used in diagnosis, treatment planning, and
simulation.2-11 However, image
superimposition for the assessment of changes with treatment
poses many challenges. These challenges refer to registration
and homology issues and also to the difficulty of landmark
locations on anatomic surfaces.12-16
Three-dimensional landmark identification requires suitable
operational definitions of the landmark location in each of the
3 planes of space. We describe superimposition methods that do
not depend on landmarks or planes but, rather, compare the
cranial base structures voxel by voxel of each CT
acquisition. These procedures allow us to calculate the rotation
and translation parameters between 2 time-point images, display
the superimposed 3D virtual models, and measure the distances
between the 3D model?s surfaces.
CONE-BEAM CT DEVICES
NewTom 3G (Aperio Services, Sarasota, Fla), ICAT (Imaging
Sciences International, Hatfield, Pa), and HITACHI (CB MercuRay
Hitachi Medical Corporation, Tokyo, Japan) are some of the the
cone-beam (CB) CT (CBCT) scanners currently available with
full-face fields of view for craniomaxillofacial
applications. Image acquisition with these CBCT scanners differs
in patient positioning, time to complete the scan,
resolution,and radiation doses. When assessing differences in
effective radiation doses for different scanners, we also need
to consider the radiation dose to the salivary
glands.17 We have used NewTom 3G
images for reformatting the voxels for isotropic of 0.5 x 0.5 x
0.5 mm. Higher spatial resolution with smaller slice thickness
increases image file size and requires greater computational
power and more user interaction time. Each scanner software
allows reformatting of the original stack of axial images to
simulate 2-dimensional (2D) panoramic x-rays, and lateral and
anteroposterior cephalograms. Current research topics include
comparisons of CBCT and conventional cephalograms. The CBCT
cephalogram needs to simulate the perspective and magnification
of conventional x-rays to allow comparisons to the populational
norms available for our preexisting cephalometrics database
(Figs 1 and 2).
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| Fig. 1
Dolphin 3D beta version images (Dolphin Imaging and
Management, Chatsworth, Calif). A, Lateral view of 3D virtual
models with transparency of soft tissue. B, 2D cephalogram
generated from 3D models with 0 magnification and in orthogonal
projection. C, 2D maximum intensity projection
cephalogram. Dolphin 3D interface is user-friendly tool,
allowing easy segmentation of anatomic structures, 3D linear
measurements, and option of orthogonal or perspective
projections to simulate conventional cephalograms.
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| Fig. 2
Axial, lateral (sagittal), and anteroposterior (coronal)
crosssections for each CT image acquisition. Using InsightSNAP,
we can scroll through 330 axial, 360 lateral, and 360
anteroposterior slices of volumetric data. NewTom 3G software
also allows panoramic views
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FROM 2D SLICES TO 3D VIRTUAL MODELS
A key feature of CBCT images is the ability to navigate
through the volumetric data set in any orthogonal slice
window18 (axial, lateral, and
anteroposterior views; Fig 2). Instead of just analyzing 2D
crosssectional images from a 3D patient, clinicians must think
in 3D directions instead of 2D directions. From a set of more
than 300 axial crosssectional slices, it is possible to build 3D
virtual models. The first step in image processing is to convert
scanned images from DICOM to a format that allows the
segmentation of anatomic structures. Image segmentation refers
to the process of outlining the shape of structures visible in
the crosssections of a volumetric data set. After the
segmentation, a 3D graphic rendering of the volumetric object
allows navigation between voxels in the volumetric image and the
3D graphics with zooming, rotating, and panning (Figs 3 and
4). The National Institutes of Health has web pages to aid
researchers in finding available image processing
software.19 The image analysis tools
we have used at the University of North Carolina Orthodontic
Department for 3D superimpositions are open-source, freely
available software systems.
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| Fig. 3
3D virtual models of 2 patients with hemifacial microsomia,
showing segmentation of all slices stacked together without smoothing.
A, Images acquired with 12-in field of view. Note
costocondral graft establishing working condyle. B, Images acquired
with 9-in field of view. Note significant asymmetry and missing
articular fossa but presence of ramus and condyle on affected
side. (Resolution is compromised by patient motion during acquisition;
patient must remain still for 30 seconds after final alignment, and
even swallowing can cause noise.)
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| Fig. 4
Transparency of bones allows visualization of developing
permanent teeth. Panoramic x-ray suggested that surgical pins from
graft might be impairing tooth eruption, but CBCT 3D models
show that surgeon avoided tooth buds.
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CBCT APPLICATIONS
Three-dimensional CBCT images provide additional diagnostic
information on (1) size, shape, and position of mandibular
condyle heads; (2) width of the tooth-bearing portion; (3)
morphology, inclination, displacement, or deviation of the
lateral and medial surfaces of the mandibular rami and body; (4)
dental root positioning; (5) localization of impacted or
super-numerary teeth; (6) palatal morphology; and (7) morphology
of sites for placing implants or osteotomies This information
can help in identification of affected structures, treatment
planning, and future comparisons with long-term follow-up of
treatment stability (Figs 5 and 6).The identification of the
soft-tissue profile allows assessment of hard- and soft-tissue
relationships. However, CBCT does not assess muscular
morphology, and magnetic resonance imaging allows still more
accurate renderings of the soft
tissues.5,8,21 Caution is necessary in
assessing the airway with NewTom 3G images versus the iCat,
because the morphology of the airway space appears altered when
the patient lies down for the NewTom acquisition (Fig 3). An
interesting capability of 3D models is to allow superimposition
along the whole surface of the cranial base for adults or in the
anterior cranial fossae for growing children. Although
historically for 2D superimposition, we have used landmarks,
planes, or 2D projections of surfaces, now software tools
optimally align 3D CBCT data sets at different time points with
subvoxel accuracy after identification of the cranialbase
structures (Fig 7). The computed registration is then applied to
the segmented structures to measure changes with time or
treatment procedures.
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| Fig. 5
Conventional initial records suggest orthodontic treatment in
conjunction with maxillary surgery for correction of cross-bite
and anterior open-bite. A and B, 3D virtual
models and display without posterior cortical bone show lingual
tipping of maxillary premolars and molars. Patient was also
offered orthodontic correction without surgery.
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| Fig. 6
Superior views of 3D models of mandibular rami of 3 patients
with condylar shape anomalies. A, Patient with
idiopathic condylar resorption. B, Patient with left
hemimandibular hypertrophy. C, Early right condylar
fracture with abnormal growth of condyle around articular
eminence
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| Fig. 7
A, Presurgery, 1-week postsurgery, and 1-year postsurgery
3D models of patient treated with maxillary advancement and
mandibular setback. B, Superimposition of pre- and
postsurgery models showing surface distances between 2
models. Surface of cranial base was used for
registration. Cranial base color map is green (0 mm
surface distance), showing adequate match of before and after
models for cranial base structures. Note that maxilla was
brought forward as shown in red. Mandibular setback
precisely maintained rami position, sliding mandibular corpus
posteriorly, with slight counterclockwise rotation to correct
open-bite tendency. C, Surface distances between 1-week
and 1-year postsurgery models shows values close to 0 mm and
stability of surgical procedures.
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Image-analysis procedures include construction of 3D
models,18 registration and superimposition of models at various
time points,22 and calculation of the distances between the 3D
surfaces.23 The automation of these methods, by using in-house
computer tools, allows image analysis procedures to be largely
independent of observer errors.24 The superimposition methods
are fully automated, with voxel-wise rigid registration of the
cranial base to avoid observer-dependent techniques based on
overlap of anatomic landmarks. After the software masks the
maxillary and mandibular structures, it compares the grey level
intensity of each voxel in the cranial base to register the 2 CT
images. These rotation and translation parameters are also
applied to register 3D models. After registration, we can assess
the overlay of the 3D models using Mesh Valmet. MeshValmet24
software allows visual and quantitative assessment of the
location and magnitude of changes over time segmentation via
graphic overlays and calculation of the distances between the
surfaces of the 3D models at 2 time points (Fig 7). The
resulting 3D graphic display of the structure is color-coded
with the regional magnitude of the displacement between 2
segmentations. The pre- or postoperative segmentation results
are overlaid on the CBCT image data for visual
comparison. Semitransparency tools can be used for visualization
of the 3D overlays (Fig 8).
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| Fig. 8
Semitransparent overlay of registered 1-week and 1-year
postsurgery mandibular models of patient in Fig 7. Other
anatomic structures are masked for better visualization of
changes in mandible. Red, presurgery model; blue,
area where pre- and postsurgery models overlap; green,
postsurgery model.
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Surface distance calculation can be applied to quantify
displacement with growth and
treatment.25 The calculation of
surface distance for each boundary point is computationally
expensive, because each contour point is compared with all the
others. MeshValmet calculates all the 3D euclidean distances
from the presurgery model to the overlaid postsurgery model, to
measure the displacement. This measurement does not reflect
properties integrated along the whole boundary and surface. For
these reasons, the measurement of surface distances must be
complemented by visualization of the 3D color-coded maps. The
use of shape analysis and semilandmarks on the surface to
incorporate information about vectors near the landmark will
guide future research on 3D displacement with growth and
treatment. The visualization of 3D model superimposition and the
surface distance calculations can be used to identify treatment
outcomes and stability after
treatment.20
Recent Advances
Scanners and softwares have been continuously updated over the
last months. Increased fields of view, ability to navigate through
cross-sectional slices aiding identification of 3D landmarks, faster
rendering, 3D cameras registered to the CBCT acquisition, 3D
soft tissue paradigm and 3D surgical computer simulation are
current areas of research that will hopefully lead to diagnostic and
treatment planning advances ( Figures 9-12) .
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| Fig. 9
Surface distance color maps between pre- and
postsurgery models are shown in the top row and
between pre- and 6 weeks postsurgery in the bottom row.
Surface of cranial base was used for registration. Note
that the maxillary advancement is shown in red and the
mandibular setback in blue. The color maps in the top
row show the postsurgical swelling. The cervical area
shows artifacts of change in position of the head in
different CBCT acquisitions as these models were build
from newTom 3G images that were acquired with the
patient head lying down on a pillow.
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| Fig. 10
Images acquired with 3D facial camera
and Dolphin 10.1 build 8 (courtesy of DDI
Imaging, California) allows visualization of soft
tissue structures registered to the CBCT scan.
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| Fig. 11
Faster rendering with visualization of
both soft and hard tissue structures (Dolphin
Imaging, California)
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| Fig. 12
Surgical simulation to plan
displacement of colored segments.
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